Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stress response translation initiation inhibitor ycih | FD718_13685 | Not Available | Positive | 3034832 - 3035143 | 11076.6 |
| hypothetical protein | FD718_13690 | Not Available | Positive | 3035259 - 3036173 | 34018.5 |
| choloylglycine hydrolase family protein | FD718_13695 | Not Available | Negative | 3036242 - 3037330 | 39324.9 |
| hypothetical protein | FD718_13700 | Not Available | Negative | 3037430 - 3038650 | 45571.1 |
| hypothetical protein | FD718_13705 | Not Available | Positive | 3038914 - 3039468 | 21713.2 |
| is4 family transposase | FD718_13715 | Not Available | Positive | 3039973 - 3041181 | 45975.1 |
| sigma-54-dependent fis family transcriptional regulator | FD718_13720 | Not Available | Negative | 3041334 - 3042779 | 54149.3 |
| flagellar export chaperone flis | FD718_13725 | Not Available | Negative | 3043071 - 3043466 | 14682.7 |
| flagellar biosynthesis protein flis | FD718_13730 | Not Available | Negative | 3043509 - 3043820 | 12023.4 |
| flagellar hook protein | FD718_13735 | Not Available | Negative | 3043833 - 3045260 | 51878.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


