Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD718_13635 | Not Available | Negative | 3025037 - 3025366 | 12037.6 |
| bifunctional acetate--coa ligase family protein/gnat family n-acetyltransferase | FD718_13640 | Not Available | Negative | 3025731 - 3028430 | 99329.1 |
| hypothetical protein | FD718_13645 | Not Available | Negative | 3028552 - 3029061 | 18814.3 |
| hypothetical protein | FD718_13650 | Not Available | Positive | 3029241 - 3029828 | 21175.1 |
| sugar o-acetyltransferase | FD718_13655 | Not Available | Positive | 3030005 - 3030559 | 20247.2 |
| d-alanine--d-alanine ligase | FD718_13660 | Not Available | Positive | 3030763 - 3031755 | 36710.2 |
| integrase | FD718_13665 | Not Available | Negative | 3031851 - 3032822 | 36967.4 |
| duf3319 domain-containing protein | FD718_13670 | Not Available | Positive | 3033092 - 3033448 | 13779.6 |
| hypothetical protein | FD718_13675 | Not Available | Negative | 3033505 - 3034011 | 18649.4 |
| had family phosphatase | FD718_13680 | Not Available | Negative | 3034110 - 3034709 | 22820.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


