Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | FD718_13535 | Not Available | Positive | 2996110 - 2997243 | 40579.7 |
| efflux rnd transporter permease subunit | FD718_13540 | Not Available | Positive | 2997253 - 3000408 | 113497.0 |
| bcct family transporter | FD718_13545 | Not Available | Negative | 3000682 - 3002235 | 55018.1 |
| duf1800 domain-containing protein | FD718_13550 | Not Available | Positive | 3002723 - 3004261 | 58122.3 |
| duf1501 domain-containing protein | FD718_13555 | Not Available | Positive | 3004258 - 3005568 | 47872.8 |
| duf417 family protein | FD718_13560 | Not Available | Positive | 3005751 - 3006245 | 18173.6 |
| mfs transporter | FD718_13565 | Not Available | Positive | 3006381 - 3007622 | 44859.2 |
| peptidase m23 | FD718_13570 | Not Available | Positive | 3007612 - 3008277 | 24935.4 |
| atp-dependent rna helicase hrpa | FD718_13575 | Not Available | Negative | 3008387 - 3012301 | 150558.0 |
| zinc transporter zntb | FD718_13580 | Not Available | Positive | 3012641 - 3013606 | 36634.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


