Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acylphosphatase | FD718_13485 | Not Available | Positive | 2985174 - 2985446 | 10020.1 |
| sulfurtransferase tuse | FD718_13490 | Not Available | Negative | 2985576 - 2985905 | 12493.1 |
| bax inhibitor-1/ycca family protein | FD718_13495 | Not Available | Negative | 2986039 - 2986701 | 23562.4 |
| amino acid abc transporter substrate-binding protein | FD718_13500 | Not Available | Negative | 2986909 - 2987937 | 38367.0 |
| ofa family mfs transporter | FD718_13505 | Not Available | Negative | 2988091 - 2989320 | 43189.0 |
| sodium/glutamate symporter | FD718_13510 | Not Available | Negative | 2989570 - 2990802 | 43969.8 |
| hypothetical protein | FD718_13515 | Not Available | Negative | 2991701 - 2992054 | 13761.2 |
| duf2007 domain-containing protein | FD718_13520 | Not Available | Positive | 2992324 - 2992563 | 8654.18 |
| eal domain-containing protein | FD718_13525 | Not Available | Negative | 2992530 - 2994938 | 91712.4 |
| duf1097 domain-containing protein | FD718_13530 | Not Available | Positive | 2995217 - 2995699 | 17008.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


