Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatase | FD718_13435 | Not Available | Positive | 2973098 - 2973601 | 18369.9 |
| organoarsenical effux mfs transporter arsj | FD718_13440 | Not Available | Positive | 2973651 - 2974883 | 44519.5 |
| had family phosphatase | FD718_13445 | Not Available | Positive | 2974942 - 2975622 | 24888.8 |
| hypothetical protein | FD718_13450 | Not Available | Positive | 2975676 - 2975945 | 10154.2 |
| alanine dehydrogenase | FD718_13455 | Not Available | Positive | 2976339 - 2977454 | 39476.1 |
| cysteine hydrolase | FD718_13460 | Not Available | Negative | 2977539 - 2978102 | 21057.0 |
| murein l,d-transpeptidase catalytic domain family protein | FD718_13465 | Not Available | Negative | 2978247 - 2978897 | 24329.6 |
| chitinase | FD718_13470 | Not Available | Negative | 2979364 - 2982525 | 113127.0 |
| duf2057 domain-containing protein | FD718_13475 | Not Available | Negative | 2982879 - 2983508 | 22864.1 |
| methyltransferase domain-containing protein | FD718_13480 | Not Available | Negative | 2983792 - 2984982 | 44100.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


