Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD718_13385 | Not Available | Positive | 2961361 - 2961882 | 19672.8 |
| class i sam-dependent methyltransferase | FD718_13390 | Not Available | Negative | 2961940 - 2962749 | 30867.7 |
| hypothetical protein | FD718_13395 | Not Available | Positive | 2962940 - 2963659 | 26488.0 |
| peptidase | FD718_13400 | Not Available | Negative | 2963701 - 2965416 | 64207.7 |
| wax ester/triacylglycerol synthase family o-acyltransferase | FD718_13405 | Not Available | Positive | 2966072 - 2967754 | 62330.2 |
| acyl-coa-binding protein | FD718_13410 | Not Available | Negative | 2967886 - 2968152 | 9880.54 |
| choline dehydrogenase | FD718_13415 | Not Available | Positive | 2968361 - 2969992 | 59947.6 |
| alpha/beta hydrolase | FD718_13420 | Not Available | Positive | 2969967 - 2971034 | 40255.1 |
| metalloregulator arsr/smtb family transcription factor | FD718_13425 | Not Available | Positive | 2971086 - 2971844 | 28574.6 |
| arsj-associated glyceraldehyde-3-phosphate dehydrogenase | FD718_13430 | Not Available | Positive | 2972022 - 2973035 | 36759.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


