Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system protein gcvh | FD718_13335 | Not Available | Positive | 2951475 - 2951858 | 13595.7 |
| aminomethyl-transferring glycine dehydrogenase | FD718_13340 | Not Available | Positive | 2951979 - 2954852 | 105597.0 |
| hypothetical protein | FD718_13345 | Not Available | Negative | 2955163 - 2956035 | 31323.6 |
| duf3265 domain-containing protein | FD718_13350 | Not Available | Negative | 2956087 - 2956209 | 4750.87 |
| hypothetical protein | FD718_13355 | Not Available | Negative | 2956194 - 2956736 | 20633.4 |
| Trna-cys | Not Available | Not Available | Positive | 2957028 - 2957101 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2957121 - 2957205 | Not Available |
| lysr family transcriptional regulator | FD718_13370 | Not Available | Negative | 2957326 - 2958270 | 35810.2 |
| mfs transporter | FD718_13375 | Not Available | Positive | 2958369 - 2960003 | 57790.6 |
| linear amide c-n hydrolase | FD718_13380 | Not Available | Positive | 2960019 - 2961140 | 41219.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


