Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | FD718_13235 | Not Available | Negative | 2924454 - 2926181 | 63891.3 |
| arginine decarboxylase | FD718_13240 | Not Available | Positive | 2927134 - 2929418 | 85069.9 |
| diguanylate cyclase | FD718_13245 | Not Available | Positive | 2929516 - 2930748 | 47830.4 |
| glycosyltransferase family 2 protein | FD718_13250 | Not Available | Positive | 2930735 - 2932051 | 50938.1 |
| hlyd family efflux transporter periplasmic adaptor subunit | FD718_13255 | Not Available | Positive | 2932053 - 2933090 | 40034.5 |
| vanz family protein | FD718_13260 | Not Available | Positive | 2933727 - 2934089 | 13484.0 |
| mfs transporter | FD718_13265 | Not Available | Negative | 2934120 - 2934806 | 25474.8 |
| carbamate kinase | FD718_13270 | Not Available | Positive | 2935298 - 2936227 | 33302.8 |
| dimethylsulfoxide reductase | FD718_13275 | Not Available | Negative | 2937005 - 2937763 | 27339.4 |
| pyrimidine-specific ribonucleoside hydrolase riha | FD718_13280 | Not Available | Positive | 2938093 - 2939031 | 34061.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


