Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | FD718_13185 | Not Available | Positive | 2911830 - 2912399 | 22230.0 |
| gnat family n-acetyltransferase | FD718_13190 | Not Available | Positive | 2912482 - 2912952 | 18018.4 |
| oligopeptidase a | FD718_13195 | Not Available | Negative | 2913027 - 2915069 | 76688.8 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | FD718_13200 | Not Available | Positive | 2915267 - 2916106 | 32200.8 |
| glutathione-disulfide reductase | FD718_13205 | Not Available | Positive | 2916279 - 2917634 | 48555.3 |
| iron-containing alcohol dehydrogenase | FD718_13210 | Not Available | Negative | 2917797 - 2918948 | 40895.0 |
| yjih family protein | FD718_13215 | Not Available | Positive | 2919434 - 2920801 | 49057.3 |
| abc transporter permease | FD718_13220 | Not Available | Negative | 2920856 - 2921797 | 34686.9 |
| abc transporter permease | FD718_13225 | Not Available | Negative | 2921800 - 2922777 | 35566.2 |
| abc transporter substrate-binding protein | FD718_13230 | Not Available | Negative | 2922834 - 2924393 | 58015.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


