Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| non-heme ferritin | FD718_13135 | Not Available | Negative | 2901658 - 2902185 | 19860.5 |
| universal stress global response regulator uspa | FD718_13140 | Not Available | Positive | 2902440 - 2902862 | 15477.6 |
| dmt family transporter | FD718_13145 | Not Available | Positive | 2902974 - 2903867 | 32848.1 |
| nad(p)h-flavin reductase | FD718_13150 | Not Available | Negative | 2903963 - 2904667 | 25809.7 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | FD718_13155 | Not Available | Negative | 2904676 - 2904942 | 9878.14 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | FD718_13160 | Not Available | Negative | 2905001 - 2906857 | 69575.8 |
| transcription termination factor rho | FD718_13165 | Not Available | Negative | 2907054 - 2908313 | 46873.8 |
| thioredoxin trxa | FD718_13170 | Not Available | Negative | 2908525 - 2908851 | 11597.0 |
| atp-dependent rna helicase rhlb | FD718_13175 | Not Available | Positive | 2908964 - 2910268 | 48839.5 |
| guanosine-5'-triphosphate,3'-diphosphate diphosphatase | FD718_13180 | Not Available | Positive | 2910284 - 2911783 | 55593.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


