Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | FD718_13080 | Not Available | Positive | 2893221 - 2894354 | 43236.8 |
| eal domain-containing protein | FD718_13085 | Not Available | Positive | 2894597 - 2895202 | 22940.2 |
| is4-like element isvsa5 family transposase | FD718_13090 | Not Available | Negative | 2895263 - 2896471 | 46030.1 |
| sodium/glutamate symporter | FD718_13095 | Not Available | Negative | 2896411 - 2896578 | 6433.0 |
| transcriptional regulator asnc | FD718_13105 | Not Available | Positive | 2897530 - 2897991 | 17257.9 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | FD718_13110 | Not Available | Negative | 2898050 - 2898727 | 24370.2 |
| hypothetical protein | FD718_13115 | Not Available | Negative | 2898879 - 2899091 | 8034.63 |
| cold-shock protein | FD718_13120 | Not Available | Negative | 2899385 - 2899594 | 7391.69 |
| nad(p)/fad-dependent oxidoreductase | FD718_13125 | Not Available | Negative | 2899906 - 2901093 | 43368.9 |
| universal stress protein uspb | FD718_13130 | Not Available | Negative | 2901236 - 2901571 | 12802.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


