Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease adapter clps | FD718_13030 | Not Available | Negative | 2882875 - 2883195 | 12245.8 |
| cold shock domain-containing protein cspd | FD718_13035 | Not Available | Positive | 2883453 - 2883674 | 8084.45 |
| nadp-dependent isocitrate dehydrogenase | FD718_13040 | Not Available | Negative | 2884100 - 2885353 | 45658.8 |
| pseudouridine synthase | FD718_13045 | Not Available | Positive | 2885496 - 2886143 | 24616.8 |
| trna 2-thiouridine(34) synthase mnma | FD718_13050 | Not Available | Positive | 2886420 - 2887532 | 41529.2 |
| high frequency lysogenization protein hfld | FD718_13055 | Not Available | Positive | 2887548 - 2888168 | 22932.1 |
| adenylosuccinate lyase | FD718_13060 | Not Available | Positive | 2888251 - 2889618 | 51290.3 |
| anaerobic nitric oxide reductase flavorubredoxin | FD718_13065 | Not Available | Positive | 2889882 - 2891369 | 55355.7 |
| nadh:flavorubredoxin reductase norw | FD718_13070 | Not Available | Positive | 2891394 - 2892545 | 41393.8 |
| duf1294 domain-containing protein | FD718_13075 | Not Available | Negative | 2892622 - 2892984 | 13953.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


