Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eal domain-containing protein | FD718_12980 | Not Available | Negative | 2868335 - 2870539 | 82957.4 |
| cell division protein ftsk | FD718_12985 | Not Available | Negative | 2871123 - 2872161 | 37596.1 |
| leucine-responsive transcriptional regulator lrp | FD718_12990 | Not Available | Negative | 2872649 - 2873143 | 18861.8 |
| thioredoxin-disulfide reductase | FD718_12995 | Not Available | Positive | 2873813 - 2874772 | 34556.0 |
| cysteine/glutathione abc transporter permease/atp-binding protein cydd | FD718_13000 | Not Available | Positive | 2874921 - 2876702 | 65445.8 |
| cysteine/glutathione abc transporter atp-binding protein/permease cydc | FD718_13005 | Not Available | Positive | 2876695 - 2878416 | 63448.8 |
| leucyl/phenylalanyl-trna--protein transferase | FD718_13010 | Not Available | Positive | 2878606 - 2879319 | 26803.9 |
| arginyltransferase | FD718_13015 | Not Available | Positive | 2879323 - 2880015 | 27135.2 |
| translation initiation factor if-1 | FD718_13020 | Not Available | Positive | 2880215 - 2880433 | 8219.13 |
| atp-dependent clp protease atp-binding subunit clpa | FD718_13025 | Not Available | Negative | 2880566 - 2882830 | 83637.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


