Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | FD718_12925 | Not Available | Positive | 2852371 - 2853117 | 28010.6 |
| phosphomannomutase | FD718_12930 | Not Available | Positive | 2853121 - 2854545 | 51774.6 |
| utp--glucose-1-phosphate uridylyltransferase galu | FD718_12935 | Not Available | Positive | 2854555 - 2855445 | 32333.3 |
| hypothetical protein | FD718_12940 | Not Available | Negative | 2855618 - 2856460 | 32408.6 |
| n-acetylmuramoyl-l-alanine amidase | FD718_12945 | Not Available | Negative | 2856457 - 2857083 | 23819.5 |
| mbl fold metallo-hydrolase | FD718_12950 | Not Available | Positive | 2857333 - 2858730 | 51600.3 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | FD718_12960 | Not Available | Negative | 2860788 - 2862908 | 78815.2 |
| beta-ketoacyl-acp synthase i | FD718_12965 | Not Available | Positive | 2863098 - 2864312 | 42855.1 |
| phospholipase | FD718_12970 | Not Available | Negative | 2864644 - 2866500 | 70143.9 |
| tat pathway signal protein | FD718_12975 | Not Available | Negative | 2866563 - 2867768 | 44559.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


