Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | FD718_12875 | Not Available | Positive | 2842984 - 2843907 | 35539.6 |
| hypothetical protein | FD718_12880 | Not Available | Positive | 2843904 - 2844176 | 10810.6 |
| hypothetical protein | FD718_12885 | Not Available | Positive | 2844412 - 2844873 | 17946.8 |
| glycosyltransferase | FD718_12890 | Not Available | Positive | 2844866 - 2845903 | 39771.3 |
| hypothetical protein | FD718_12895 | Not Available | Positive | 2845896 - 2847128 | 47666.2 |
| glycosyltransferase | FD718_12900 | Not Available | Positive | 2847125 - 2848363 | 46972.4 |
| gdp-mannose 4,6-dehydratase | FD718_12905 | Not Available | Positive | 2848393 - 2849508 | 41557.5 |
| gdp-l-fucose synthase | FD718_12910 | Not Available | Positive | 2849508 - 2850485 | 36599.6 |
| gdp-mannose mannosyl hydrolase | FD718_12915 | Not Available | Positive | 2850488 - 2850949 | 17675.1 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | FD718_12920 | Not Available | Positive | 2850965 - 2852371 | 51852.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


