Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ecf-type riboflavin transporter substrate-binding protein | FD718_12825 | Not Available | Negative | 2832260 - 2832811 | 19693.8 |
| two-component system response regulator uvry | FD718_12830 | Not Available | Positive | 2833553 - 2834197 | 23919.1 |
| excinuclease abc subunit uvrc | FD718_12835 | Not Available | Positive | 2834197 - 2836050 | 70220.5 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | FD718_12840 | Not Available | Positive | 2836167 - 2836727 | 21514.7 |
| Trna-cys | Not Available | Not Available | Positive | 2837056 - 2837129 | Not Available |
| udp-n-acetylglucosamine--undecaprenyl-phosphate n-acetylglucosaminephosphotransferase | FD718_12850 | Not Available | Positive | 2837230 - 2838315 | 39682.2 |
| hypothetical protein | FD718_12855 | Not Available | Negative | 2838344 - 2838454 | 4586.74 |
| flippase | FD718_12860 | Not Available | Positive | 2839001 - 2840284 | 48733.6 |
| hypothetical protein | FD718_12865 | Not Available | Positive | 2840281 - 2841762 | 58177.0 |
| glycosyltransferase | FD718_12870 | Not Available | Positive | 2841759 - 2842991 | 46099.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


