Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | FD718_12725 | Not Available | Negative | 2808487 - 2809701 | 44075.5 |
| hypothetical protein | FD718_12730 | Not Available | Negative | 2809701 - 2809880 | 6601.89 |
| hypothetical protein | FD718_12735 | Not Available | Negative | 2810150 - 2810548 | 14767.8 |
| mfs transporter | FD718_12740 | Not Available | Positive | 2810902 - 2812803 | 69964.7 |
| hlyd family efflux transporter periplasmic adaptor subunit | FD718_12745 | Not Available | Positive | 2812947 - 2813906 | 34798.6 |
| abc transporter atp-binding protein | FD718_12750 | Not Available | Positive | 2813899 - 2814825 | 33875.1 |
| abc transporter permease | FD718_12755 | Not Available | Positive | 2814825 - 2815922 | 40447.0 |
| hypothetical protein | FD718_12760 | Not Available | Positive | 2816392 - 2817246 | 33081.3 |
| dihydrofolate reductase | FD718_12765 | Not Available | Negative | 2817314 - 2817847 | 19931.1 |
| hypothetical protein | FD718_12770 | Not Available | Positive | 2818178 - 2818555 | 14603.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


