Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-sulfur cluster-binding protein | FD718_12675 | Not Available | Negative | 2796289 - 2797704 | 52546.1 |
| (fe-s)-binding protein | FD718_12680 | Not Available | Negative | 2797716 - 2798435 | 26271.1 |
| l-lactate permease | FD718_12685 | Not Available | Negative | 2798617 - 2800206 | 56405.0 |
| atp-dependent protease | FD718_12690 | Not Available | Negative | 2800896 - 2801462 | 21686.8 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | FD718_12695 | Not Available | Negative | 2801534 - 2802811 | 47279.9 |
| biotin synthase biob | FD718_12700 | Not Available | Positive | 2802995 - 2804047 | 39478.6 |
| 8-amino-7-oxononanoate synthase | FD718_12705 | Not Available | Positive | 2804031 - 2805224 | 43782.6 |
| malonyl-acp o-methyltransferase bioc | FD718_12710 | Not Available | Positive | 2805226 - 2806083 | 31613.7 |
| atp-dependent dethiobiotin synthetase biod | FD718_12715 | Not Available | Positive | 2806076 - 2806759 | 24951.1 |
| protease htpx | FD718_12720 | Not Available | Positive | 2807442 - 2808323 | 31910.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


