Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nupc/nupg family nucleoside cnt transporter | FD718_12625 | Not Available | Negative | 2784013 - 2785212 | 43665.6 |
| eal domain-containing protein | FD718_12630 | Not Available | Negative | 2785511 - 2787577 | 79016.5 |
| ggdef domain-containing protein | FD718_12635 | Not Available | Negative | 2787574 - 2788911 | 52079.6 |
| thiamine phosphate synthase | FD718_12640 | Not Available | Negative | 2789073 - 2789684 | 22048.9 |
| hydroxyethylthiazole kinase | FD718_12645 | Not Available | Negative | 2789709 - 2790515 | 28356.1 |
| asparagine--trna ligase | FD718_12650 | Not Available | Negative | 2790581 - 2791981 | 52667.4 |
| 7-carboxy-7-deazaguanine synthase quee | FD718_12655 | Not Available | Negative | 2792205 - 2792873 | 24580.5 |
| rok family protein | FD718_12660 | Not Available | Positive | 2793103 - 2794317 | 44289.8 |
| lysr family transcriptional regulator | FD718_12665 | Not Available | Negative | 2794400 - 2795302 | 33424.2 |
| lactate utilization protein c | FD718_12670 | Not Available | Negative | 2795525 - 2796274 | 27396.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


