Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | FD718_12575 | Not Available | Positive | 2774432 - 2775085 | 23811.3 |
| transcriptional regulator uhpa | FD718_12580 | Not Available | Positive | 2775226 - 2775834 | 21852.4 |
| signal transduction histidine-protein kinase/phosphatase uhpb | FD718_12585 | Not Available | Positive | 2775834 - 2777366 | 57522.9 |
| mfs transporter | FD718_12590 | Not Available | Positive | 2777382 - 2778713 | 49600.1 |
| sigma-70 family rna polymerase sigma factor | FD718_12595 | Not Available | Positive | 2778947 - 2779816 | 33428.3 |
| duf2982 domain-containing protein | FD718_12600 | Not Available | Negative | 2779813 - 2780472 | 25223.0 |
| marr family transcriptional regulator | FD718_12605 | Not Available | Positive | 2780773 - 2781174 | 14311.4 |
| hypothetical protein | FD718_12610 | Not Available | Positive | 2781373 - 2781678 | 12120.5 |
| aspartate/tyrosine/aromatic aminotransferase | FD718_12615 | Not Available | Negative | 2781728 - 2782918 | 43454.9 |
| hypothetical protein | FD718_12620 | Not Available | Negative | 2783062 - 2783820 | 28494.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


