Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5062 family protein | FD718_12475 | Not Available | Negative | 2753645 - 2753905 | 10010.4 |
| duf3080 domain-containing protein | FD718_12480 | Not Available | Negative | 2754053 - 2755081 | 40311.6 |
| mate family efflux transporter | FD718_12485 | Not Available | Negative | 2755301 - 2756671 | 49673.7 |
| riboflavin synthase | FD718_12490 | Not Available | Positive | 2756937 - 2757545 | 22302.0 |
| cpxcg motif-containing cysteine-rich protein | FD718_12495 | Not Available | Negative | 2757701 - 2757904 | 7610.81 |
| hexitol phosphatase hxpb | FD718_12500 | Not Available | Negative | 2758287 - 2758940 | 23684.5 |
| fructosamine kinase family protein | FD718_12505 | Not Available | Negative | 2759076 - 2759942 | 33356.5 |
| threonine--trna ligase | FD718_12510 | Not Available | Positive | 2760454 - 2762385 | 73666.1 |
| translation initiation factor if-3 | FD718_12515 | Not Available | Positive | 2762389 - 2762940 | 20627.1 |
| 50s ribosomal protein l35 | FD718_12520 | Not Available | Positive | 2763041 - 2763235 | 7296.28 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


