Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | FD718_12375 | Not Available | Positive | 2734824 - 2735291 | 17960.9 |
| porin family protein | FD718_12380 | Not Available | Positive | 2735443 - 2736081 | 23873.6 |
| hypothetical protein | FD718_12385 | Not Available | Negative | 2736180 - 2736656 | 18001.4 |
| winged helix family transcriptional regulator | FD718_12390 | Not Available | Negative | 2736843 - 2738255 | 53196.9 |
| hypothetical protein | FD718_12395 | Not Available | Negative | 2738460 - 2739299 | 31510.2 |
| hypothetical protein | FD718_12400 | Not Available | Negative | 2739501 - 2739890 | 14994.2 |
| terc family protein | FD718_12405 | Not Available | Positive | 2740666 - 2741640 | 36466.4 |
| capsular biosynthesis protein | FD718_12410 | Not Available | Positive | 2742279 - 2743649 | 50973.2 |
| hypothetical protein | FD718_12415 | Not Available | Negative | 2743893 - 2744918 | 37164.6 |
| crp/fnr family transcriptional regulator | FD718_12420 | Not Available | Positive | 2745170 - 2745847 | 25574.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


