Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 7-cyano-7-deazaguanine synthase quec | FD718_12315 | Not Available | Negative | 2723839 - 2724543 | 25917.8 |
| plp-dependent cysteine synthase family protein | FD718_12320 | Not Available | Negative | 2724932 - 2726020 | 40696.1 |
| lrp/asnc family transcriptional regulator | FD718_12325 | Not Available | Positive | 2726271 - 2726732 | 17592.3 |
| acyl-coa thioesterase ii | FD718_12330 | Not Available | Negative | 2726816 - 2727682 | 32705.2 |
| lipoprotein-related protein | FD718_12335 | Not Available | Positive | 2727817 - 2728239 | 15287.3 |
| mgmt family protein | FD718_12340 | Not Available | Negative | 2728303 - 2728608 | 11532.7 |
| hypothetical protein | FD718_12345 | Not Available | Positive | 2728720 - 2729457 | 26078.2 |
| nuclease | FD718_12360 | Not Available | Positive | 2730162 - 2730935 | 29672.2 |
| duf4297 domain-containing protein | FD718_12365 | Not Available | Positive | 2731467 - 2732540 | 40582.5 |
| hypothetical protein | FD718_12370 | Not Available | Positive | 2732592 - 2734316 | 65399.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


