Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aromatic hydrocarbon degradation protein | FD718_12265 | Not Available | Negative | 2710463 - 2711704 | 44986.7 |
| duf3379 domain-containing protein | FD718_12270 | Not Available | Negative | 2712093 - 2712806 | 26152.3 |
| sigma-70 family rna polymerase sigma factor | FD718_12275 | Not Available | Negative | 2712793 - 2713362 | 22429.5 |
| acetyl-coa c-acyltransferase fadi | FD718_12280 | Not Available | Positive | 2714013 - 2715323 | 46537.2 |
| fatty acid oxidation complex subunit alpha fadj | FD718_12285 | Not Available | Positive | 2715323 - 2717443 | 77230.7 |
| insulinase family protein | FD718_12290 | Not Available | Negative | 2718034 - 2720802 | 106023.0 |
| phosphohistidine phosphatase sixa | FD718_12295 | Not Available | Positive | 2721239 - 2721712 | 17729.9 |
| hypothetical protein | FD718_12300 | Not Available | Positive | 2721801 - 2722100 | 10916.1 |
| endonuclease smrb | FD718_12305 | Not Available | Negative | 2722195 - 2722725 | 20021.2 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | FD718_12310 | Not Available | Positive | 2722779 - 2723711 | 35506.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


