Photobacterium damselae subsp. damselae strain 144bp-OG3

Motile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium damselae subsp. damselae strain 144bp-OG3 is a Gram-negative bacterium primarily found in coastal waters, estuaries, and marine environments, including associations with seaweeds and sediments. This organism exhibits mobility, facilitated by the presence of flagella, and thrives in mesophilic temperature ranges. Strain 144bp-OG3 has a single replicon and is notable for its diverse array of hosts, which include Homo sapiens, Pancrustacea, Aves, Mollusca, and Cetacea, specifically Alca torda and Tursiops truncatus. This broad host range indicates its ecological versatility and potential impact on various marine and terrestrial ecosystems. From a health perspective, Photobacterium damselae subsp. damselae strain 144bp-OG3 is associated with several significant infections in humans and animals. It is known to cause pneumonia, wound infections, and necrotizing fasciitis, along with other conditions such as hemorrhagic septicemia and chronic suppurative pneumonia. These health effects highlight the bacterium's pathogenic potential, particularly in aquatic organisms and humans who may come into contact with contaminated marine environments. The presence of strain 144bp-OG3 in diverse habitats and its ability to infect multiple hosts underscore its ecological importance and potential role in marine disease dynamics. Understanding its interactions within these ecosystems can provide insights into the health of marine environments and the consequences of bacterial infections in both wildlife and human populations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium damselae
Strainsubsp. damselae strain 144bp-OG3

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangemesophilic
Habitatcoastal waters; estuaries; Marine; oceans; seaweeds; sediments
Biotic relationshipNot Available
Host(s)Homo sapiens, Pancrustacea, Aves
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium damselae subsp. damselae strain 144bp-OG3

Gene Summary

Adenine Count

1418061 bp

Thymine Count

1414440 bp

Guanine Count

971104 bp

Cytosine Count

957116 bp

Genome Length

4760721 bp

Protein-coding Genes

4126 genes

Non-Coding Genes

87 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aromatic hydrocarbon degradation proteinFD718_12265Not AvailableNegative2710463 - 271170444986.7
duf3379 domain-containing proteinFD718_12270Not AvailableNegative2712093 - 271280626152.3
sigma-70 family rna polymerase sigma factorFD718_12275Not AvailableNegative2712793 - 271336222429.5
acetyl-coa c-acyltransferase fadiFD718_12280Not AvailablePositive2714013 - 271532346537.2
fatty acid oxidation complex subunit alpha fadjFD718_12285Not AvailablePositive2715323 - 271744377230.7
insulinase family proteinFD718_12290Not AvailableNegative2718034 - 2720802106023.0
phosphohistidine phosphatase sixaFD718_12295Not AvailablePositive2721239 - 272171217729.9
hypothetical proteinFD718_12300Not AvailablePositive2721801 - 272210010916.1
endonuclease smrbFD718_12305Not AvailableNegative2722195 - 272272520021.2
50s ribosomal protein l3 n(5)-glutamine methyltransferaseFD718_12310Not AvailablePositive2722779 - 272371135506.2

Displaying genes 2441 – 2450 of 4213 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Haemorrhagic septicemiaCausesPMC12895208
Skin lesionsCausesPMC12895208
Necrotizing fasciitisCausesPMC12895208
Soft-tissue infectionCausesPMC8231020
Chronic suppurative pneumoniaCausesPMC9796189
Splenic lymphoid depletionCausesPMC9796189
Wound infectionsCausesPMC9796189
Hemorrhagic septicemiaCausesPMC9796189
PneumoniaCausesPMC9796189

Displaying health effects 1 – 9 of 9 in total