Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor flia | FD718_12165 | Not Available | Positive | 2691463 - 2692185 | 27145.4 |
| chemotaxis protein chey | FD718_12170 | Not Available | Positive | 2692229 - 2692612 | 14461.8 |
| protein phosphatase chez | FD718_12175 | Not Available | Positive | 2692649 - 2693371 | 27268.6 |
| chemotaxis protein chea | FD718_12180 | Not Available | Positive | 2693381 - 2695684 | 83266.5 |
| chemotaxis response regulator protein-glutamate methylesterase | FD718_12185 | Not Available | Positive | 2695759 - 2697012 | 45072.9 |
| para family protein | FD718_12190 | Not Available | Positive | 2697024 - 2697800 | 28940.5 |
| chemotaxis protein chew | FD718_12195 | Not Available | Positive | 2698213 - 2698968 | 28333.5 |
| chemotaxis protein chew | FD718_12200 | Not Available | Positive | 2698978 - 2699472 | 18361.8 |
| duf2802 domain-containing protein | FD718_12205 | Not Available | Positive | 2699472 - 2699906 | 16600.3 |
| cytochrome c biogenesis heme-transporting atpase ccma | FD718_12210 | Not Available | Positive | 2700290 - 2700940 | 24195.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


