Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain-containing protein | FD718_12065 | Not Available | Positive | 2671195 - 2672208 | 36891.1 |
| sigma-54-dependent fis family transcriptional regulator | FD718_12070 | Not Available | Positive | 2672212 - 2673669 | 53850.3 |
| flagellar hook-basal body complex protein flie | FD718_12075 | Not Available | Positive | 2673777 - 2674088 | 11222.4 |
| flagellar basal body m-ring protein flif | FD718_12080 | Not Available | Positive | 2674127 - 2675872 | 63799.4 |
| flagellar motor switch protein flig | FD718_12085 | Not Available | Positive | 2675862 - 2676902 | 38388.1 |
| flagellar assembly protein flih | FD718_12090 | Not Available | Positive | 2676914 - 2677729 | 30528.3 |
| flagellar protein export atpase flii | FD718_12095 | Not Available | Positive | 2677726 - 2679039 | 46478.6 |
| flagella biosynthesis chaperone flij | FD718_12100 | Not Available | Positive | 2679134 - 2679586 | 17959.4 |
| flagellar hook-length control protein flik | FD718_12105 | Not Available | Positive | 2679909 - 2681255 | 48310.0 |
| flagellar basal body-associated protein flil | FD718_12110 | Not Available | Positive | 2681292 - 2681756 | 17025.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


