Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| envelope biogenesis factor elyc | FD718_12015 | Not Available | Positive | 2659709 - 2660545 | 30996.9 |
| l-cystine transporter | FD718_12020 | Not Available | Positive | 2660875 - 2662269 | 48650.5 |
| ribosome-associated translation inhibitor raia | FD718_12025 | Not Available | Positive | 2662607 - 2662972 | 14022.8 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | FD718_12030 | Not Available | Negative | 2663073 - 2663819 | 27745.9 |
| trm112 family protein | FD718_12035 | Not Available | Negative | 2663821 - 2664000 | 6686.06 |
| tetraacyldisaccharide 4'-kinase | FD718_12040 | Not Available | Negative | 2663981 - 2665015 | 37990.1 |
| lipid a abc transporter atp-binding protein/permease msba | FD718_12045 | Not Available | Negative | 2665015 - 2666772 | 64343.1 |
| dna internalization-related competence protein comec/rec2 | FD718_12050 | Not Available | Negative | 2666916 - 2668805 | 71914.4 |
| hypothetical protein | FD718_12055 | Not Available | Negative | 2668978 - 2670818 | 64380.3 |
| helix-turn-helix domain-containing protein | FD718_12060 | Not Available | Negative | 2670819 - 2670938 | 4611.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


