Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine--trna ligase subunit beta | FD718_11965 | Not Available | Negative | 2642493 - 2644880 | 86314.5 |
| phenylalanine--trna ligase subunit alpha | FD718_11970 | Not Available | Negative | 2644900 - 2645883 | 37280.4 |
| phenylalanyl-trna synthetase subunit alpha | FD718_11975 | Not Available | Positive | 2646184 - 2646435 | 9085.7 |
| atp-dependent helicase | FD718_11980 | Not Available | Negative | 2646645 - 2648540 | 72291.9 |
| duf2813 domain-containing protein | FD718_11985 | Not Available | Negative | 2648549 - 2650501 | 72828.9 |
| duf535 domain-containing protein | FD718_11990 | Not Available | Positive | 2651171 - 2652103 | 36260.6 |
| chromosome partition protein mukb | FD718_11995 | Not Available | Negative | 2652258 - 2656718 | 168866.0 |
| chromosome partition protein muke | FD718_12000 | Not Available | Negative | 2656718 - 2657467 | 28393.7 |
| chromosome partition protein mukf | FD718_12005 | Not Available | Negative | 2657448 - 2658770 | 50427.7 |
| trna uridine 5-oxyacetic acid(34) methyltransferase cmom | FD718_12010 | Not Available | Negative | 2658789 - 2659586 | 30280.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


