Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin | FD718_11915 | Not Available | Positive | 2629595 - 2630605 | 37358.4 |
| adenosylcobalamin-dependent ribonucleoside-diphosphate reductase | FD718_11920 | Not Available | Positive | 2631043 - 2633193 | 80498.6 |
| nrdjb | FD718_11925 | Not Available | Positive | 2633222 - 2633908 | 25773.8 |
| putative transporter | FD718_11930 | Not Available | Positive | 2634373 - 2636031 | 58742.2 |
| fusc family protein | FD718_11935 | Not Available | Positive | 2636204 - 2637247 | 40188.9 |
| 23s rrna (uracil(747)-c(5))-methyltransferase rlmc | FD718_11940 | Not Available | Negative | 2637301 - 2638440 | 42414.1 |
| vitamin b12 abc transporter atp-binding protein btud | FD718_11945 | Not Available | Negative | 2638539 - 2639300 | 27718.9 |
| vitamin b12 abc transporter permease btuc | FD718_11950 | Not Available | Negative | 2639300 - 2640295 | 35651.6 |
| succinylglutamate desuccinylase | FD718_11955 | Not Available | Negative | 2640379 - 2641410 | 38959.2 |
| integration host factor subunit alpha | FD718_11960 | Not Available | Negative | 2641673 - 2641969 | 11130.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


