Photobacterium damselae subsp. damselae strain 144bp-OG3

Motile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium damselae subsp. damselae strain 144bp-OG3 is a Gram-negative bacterium primarily found in coastal waters, estuaries, and marine environments, including associations with seaweeds and sediments. This organism exhibits mobility, facilitated by the presence of flagella, and thrives in mesophilic temperature ranges. Strain 144bp-OG3 has a single replicon and is notable for its diverse array of hosts, which include Homo sapiens, Pancrustacea, Aves, Mollusca, and Cetacea, specifically Alca torda and Tursiops truncatus. This broad host range indicates its ecological versatility and potential impact on various marine and terrestrial ecosystems. From a health perspective, Photobacterium damselae subsp. damselae strain 144bp-OG3 is associated with several significant infections in humans and animals. It is known to cause pneumonia, wound infections, and necrotizing fasciitis, along with other conditions such as hemorrhagic septicemia and chronic suppurative pneumonia. These health effects highlight the bacterium's pathogenic potential, particularly in aquatic organisms and humans who may come into contact with contaminated marine environments. The presence of strain 144bp-OG3 in diverse habitats and its ability to infect multiple hosts underscore its ecological importance and potential role in marine disease dynamics. Understanding its interactions within these ecosystems can provide insights into the health of marine environments and the consequences of bacterial infections in both wildlife and human populations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium damselae
Strainsubsp. damselae strain 144bp-OG3

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangemesophilic
Habitatcoastal waters; estuaries; Marine; oceans; seaweeds; sediments
Biotic relationshipNot Available
Host(s)Homo sapiens, Pancrustacea, Aves
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium damselae subsp. damselae strain 144bp-OG3

Gene Summary

Adenine Count

1418061 bp

Thymine Count

1414440 bp

Guanine Count

971104 bp

Cytosine Count

957116 bp

Genome Length

4760721 bp

Protein-coding Genes

4126 genes

Non-Coding Genes

87 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
porinFD718_11915Not AvailablePositive2629595 - 263060537358.4
adenosylcobalamin-dependent ribonucleoside-diphosphate reductaseFD718_11920Not AvailablePositive2631043 - 263319380498.6
nrdjbFD718_11925Not AvailablePositive2633222 - 263390825773.8
putative transporterFD718_11930Not AvailablePositive2634373 - 263603158742.2
fusc family proteinFD718_11935Not AvailablePositive2636204 - 263724740188.9
23s rrna (uracil(747)-c(5))-methyltransferase rlmcFD718_11940Not AvailableNegative2637301 - 263844042414.1
vitamin b12 abc transporter atp-binding protein btudFD718_11945Not AvailableNegative2638539 - 263930027718.9
vitamin b12 abc transporter permease btucFD718_11950Not AvailableNegative2639300 - 264029535651.6
succinylglutamate desuccinylaseFD718_11955Not AvailableNegative2640379 - 264141038959.2
integration host factor subunit alphaFD718_11960Not AvailableNegative2641673 - 264196911130.4

Displaying genes 2371 – 2380 of 4213 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Haemorrhagic septicemiaCausesPMC12895208
Skin lesionsCausesPMC12895208
Necrotizing fasciitisCausesPMC12895208
Soft-tissue infectionCausesPMC8231020
Chronic suppurative pneumoniaCausesPMC9796189
Splenic lymphoid depletionCausesPMC9796189
Wound infectionsCausesPMC9796189
Hemorrhagic septicemiaCausesPMC9796189
PneumoniaCausesPMC9796189

Displaying health effects 1 – 9 of 9 in total