Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfite reductase subunit c | FD718_11815 | Not Available | Negative | 2603027 - 2604037 | 37480.7 |
| anaerobic sulfite reductase subunit asrb | FD718_11820 | Not Available | Negative | 2604048 - 2604881 | 31302.7 |
| anaerobic sulfite reductase subunit asra | FD718_11825 | Not Available | Negative | 2604890 - 2605936 | 40213.8 |
| uroporphyrinogen-iii c-methyltransferase | FD718_11830 | Not Available | Negative | 2605936 - 2606763 | 30331.8 |
| mfs transporter tsga | FD718_11835 | Not Available | Positive | 2607176 - 2608363 | 43683.6 |
| duf4092 domain-containing protein | FD718_11840 | Not Available | Negative | 2608447 - 2612976 | 168672.0 |
| hypothetical protein | FD718_11845 | Not Available | Negative | 2613204 - 2613599 | 14956.0 |
| hypothetical protein | FD718_11850 | Not Available | Negative | 2613865 - 2614263 | 13662.3 |
| tetr/acrr family transcriptional regulator | FD718_11855 | Not Available | Negative | 2614396 - 2615025 | 23809.8 |
| efflux rnd transporter periplasmic adaptor subunit | FD718_11860 | Not Available | Positive | 2615190 - 2616281 | 40431.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


