Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybhb/ybcl family raf kinase inhibitor-like protein | FD718_11760 | Not Available | Negative | 2594989 - 2595468 | 17316.3 |
| aminoacyl-trna hydrolase | FD718_11770 | Not Available | Positive | 2595899 - 2595995 | 3424.05 |
| peptidase t | FD718_11775 | Not Available | Negative | 2596106 - 2597347 | 45655.1 |
| murr/rpir family transcriptional regulator | FD718_11780 | Not Available | Negative | 2597404 - 2598261 | 32503.8 |
| hypothetical protein | FD718_11785 | Not Available | Negative | 2598448 - 2598732 | 10693.9 |
| hypothetical protein | FD718_11790 | Not Available | Positive | 2598957 - 2599349 | 14621.3 |
| hypothetical protein | FD718_11795 | Not Available | Positive | 2599454 - 2599819 | 13446.0 |
| trap transporter large permease subunit | FD718_11800 | Not Available | Negative | 2599966 - 2601321 | 47815.5 |
| sh3 domain-containing protein | FD718_11805 | Not Available | Negative | 2601628 - 2602257 | 22715.1 |
| hypothetical protein | FD718_11810 | Not Available | Negative | 2602455 - 2602922 | 17688.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


