Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix hydrolase | FD718_11710 | Not Available | Negative | 2584004 - 2584522 | 19577.3 |
| ggdef domain-containing protein | FD718_11715 | Not Available | Negative | 2584689 - 2585741 | 39412.0 |
| alpha/beta hydrolase | FD718_11720 | Not Available | Negative | 2585853 - 2586782 | 34607.6 |
| udp-glucose 4-epimerase gale | FD718_11725 | Not Available | Positive | 2587057 - 2588073 | 36973.8 |
| dead/deah box helicase | FD718_11730 | Not Available | Positive | 2588296 - 2589642 | 51090.7 |
| mate family efflux transporter | FD718_11735 | Not Available | Positive | 2589810 - 2591177 | 49270.7 |
| spor domain-containing protein | FD718_11740 | Not Available | Negative | 2591251 - 2591793 | 20009.2 |
| translesion error-prone dna polymerase v autoproteolytic subunit | FD718_11745 | Not Available | Positive | 2592075 - 2592482 | 15374.4 |
| y-family dna polymerase | FD718_11750 | Not Available | Positive | 2592498 - 2593790 | 48828.7 |
| helix-turn-helix transcriptional regulator | FD718_11755 | Not Available | Negative | 2594096 - 2594890 | 30705.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


