Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiopurine s-methyltransferase | FD718_11455 | Not Available | Negative | 2536608 - 2537246 | 24363.0 |
| hypothetical protein | FD718_11460 | Not Available | Negative | 2537560 - 2537853 | 11299.7 |
| nitrous oxide-stimulated promoter family protein | FD718_11465 | Not Available | Positive | 2538092 - 2538520 | 16796.5 |
| spore gernimation protein | FD718_11470 | Not Available | Negative | 2538693 - 2539061 | 13366.2 |
| atp-dependent rna helicase | FD718_11475 | Not Available | Negative | 2539090 - 2541546 | 92455.0 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | FD718_11480 | Not Available | Positive | 2541750 - 2542646 | 33540.6 |
| nad-dependent malic enzyme | FD718_11485 | Not Available | Positive | 2543086 - 2544774 | 62886.5 |
| sana protein | FD718_11490 | Not Available | Positive | 2545017 - 2545691 | 25607.3 |
| dass family sodium-coupled anion symporter | FD718_11495 | Not Available | Positive | 2546173 - 2547543 | 49001.7 |
| ggdef domain-containing protein | FD718_11500 | Not Available | Negative | 2547659 - 2548963 | 49810.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


