Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3634 family protein | FD718_11355 | Not Available | Positive | 2516631 - 2516936 | 11733.8 |
| dna-binding protein | FD718_11360 | Not Available | Positive | 2516936 - 2517334 | 14054.8 |
| hypothetical protein | FD718_11365 | Not Available | Negative | 2517373 - 2517630 | 9807.9 |
| hypothetical protein | FD718_11370 | Not Available | Negative | 2517802 - 2518239 | 16675.3 |
| winged helix-turn-helix transcriptional regulator | FD718_11375 | Not Available | Negative | 2518229 - 2519017 | 29587.7 |
| haloacid dehalogenase-like hydrolase | FD718_11380 | Not Available | Positive | 2519242 - 2520201 | 36174.8 |
| hypothetical protein | FD718_11385 | Not Available | Negative | 2520372 - 2520623 | 9170.06 |
| type ii secretion system protein | FD718_11390 | Not Available | Positive | 2520742 - 2521281 | 19695.9 |
| hypothetical protein | FD718_11395 | Not Available | Negative | 2521337 - 2522830 | 56751.6 |
| hypothetical protein | FD718_11400 | Not Available | Negative | 2522837 - 2523220 | 14846.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


