Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 1b | FD718_11305 | Not Available | Positive | 2502862 - 2505405 | 94318.4 |
| Trna-thr | Not Available | Not Available | Positive | 2505661 - 2505736 | Not Available |
| bifunctional 23s rrna (guanine(2069)-n(7))-methyltransferase rlmk/23s rrna (guanine(2445)-n(2))-methyltransferase rlml | FD718_11315 | Not Available | Positive | 2506631 - 2508775 | 80929.6 |
| glutaredoxin family protein | FD718_11320 | Not Available | Positive | 2508775 - 2509038 | 9843.74 |
| abc transporter atp-binding protein | FD718_11325 | Not Available | Positive | 2509025 - 2510953 | 72825.4 |
| duf3466 family protein | FD718_11330 | Not Available | Positive | 2510953 - 2512968 | 73016.7 |
| ribosome modulation factor | FD718_11335 | Not Available | Positive | 2513127 - 2513300 | 6606.77 |
| bifunctional 3-hydroxydecanoyl-acp dehydratase/trans-2-decenoyl-acp isomerase | FD718_11340 | Not Available | Negative | 2513493 - 2514008 | 18985.1 |
| lon protease family protein | FD718_11345 | Not Available | Negative | 2514078 - 2515820 | 64431.7 |
| macrodomain ter protein matp | FD718_11350 | Not Available | Positive | 2516021 - 2516476 | 17736.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


