Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l17 | FD718_11150 | Not Available | Positive | 2471702 - 2471771 | 2158.09 |
| protein batd | FD718_11155 | Not Available | Positive | 2472148 - 2473857 | 62532.5 |
| serine/threonine transporter sstt | FD718_11160 | Not Available | Positive | 2474374 - 2475624 | 43198.6 |
| ytxh domain-containing protein | FD718_11165 | Not Available | Negative | 2475745 - 2475924 | 6792.17 |
| hypothetical protein | FD718_11170 | Not Available | Negative | 2475982 - 2476299 | 11874.0 |
| hypothetical protein | FD718_11175 | Not Available | Negative | 2476448 - 2476765 | 12428.5 |
| hlyd family secretion protein | FD718_11180 | Not Available | Negative | 2477037 - 2478260 | 45400.9 |
| mfs transporter | FD718_11185 | Not Available | Negative | 2478253 - 2478612 | 13391.3 |
| arac family transcriptional regulator | FD718_11190 | Not Available | Positive | 2478774 - 2479784 | 39048.4 |
| hypothetical protein | FD718_11195 | Not Available | Negative | 2479834 - 2480196 | 13811.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


