Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exopolyphosphatase | FD718_11050 | Not Available | Positive | 2449320 - 2450834 | 57160.1 |
| phosphate abc transporter substrate-binding protein psts family protein | FD718_11055 | Not Available | Negative | 2450797 - 2451885 | 39875.1 |
| phosphate regulon sensor histidine kinase phor | FD718_11060 | Not Available | Negative | 2451885 - 2453195 | 50278.6 |
| phosphate regulon transcriptional regulatory protein phob | FD718_11065 | Not Available | Negative | 2453313 - 2454002 | 26427.0 |
| exonuclease sbcc | FD718_11070 | Not Available | Negative | 2454272 - 2458069 | 142750.0 |
| exonuclease subunit sbcd | FD718_11075 | Not Available | Negative | 2458075 - 2459316 | 46509.6 |
| recombination-associated protein rdgc | FD718_11080 | Not Available | Positive | 2459665 - 2460579 | 34573.7 |
| hypothetical protein | FD718_11085 | Not Available | Negative | 2460631 - 2460948 | 12395.7 |
| sdr family oxidoreductase | FD718_11090 | Not Available | Negative | 2461067 - 2461864 | 28224.7 |
| metal ion permease | FD718_11095 | Not Available | Negative | 2461909 - 2462568 | 24127.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


