Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit secd | FD718_10950 | Not Available | Negative | 2425066 - 2426919 | 67193.8 |
| preprotein translocase subunit yajc | FD718_10955 | Not Available | Negative | 2426963 - 2427301 | 12170.1 |
| trna guanosine(34) transglycosylase tgt | FD718_10960 | Not Available | Negative | 2427325 - 2428458 | 42933.5 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | FD718_10965 | Not Available | Negative | 2428766 - 2429818 | 38948.2 |
| trypsin-like serine protease | FD718_10970 | Not Available | Negative | 2429913 - 2431031 | 40662.7 |
| cbs domain-containing protein | FD718_10975 | Not Available | Positive | 2431205 - 2431672 | 17039.5 |
| yfdx family protein | FD718_10980 | Not Available | Positive | 2431920 - 2432540 | 22808.3 |
| isocitrate lyase | FD718_10985 | Not Available | Negative | 2432609 - 2433916 | 47936.4 |
| malate synthase a | FD718_10990 | Not Available | Negative | 2433997 - 2435595 | 60434.1 |
| hydrogen peroxide-inducible genes activator | FD718_10995 | Not Available | Negative | 2436260 - 2437156 | 33078.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


