Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-sulfur cluster assembly protein isca | FD718_10900 | Not Available | Negative | 2413916 - 2414239 | 11528.7 |
| fe-s cluster assembly scaffold iscu | FD718_10905 | Not Available | Negative | 2414257 - 2414643 | 13687.2 |
| iscs subfamily cysteine desulfurase | FD718_10910 | Not Available | Negative | 2414681 - 2415895 | 44906.6 |
| fe-s cluster assembly transcriptional regulator iscr | FD718_10915 | Not Available | Negative | 2415927 - 2416448 | 18591.2 |
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | FD718_10920 | Not Available | Negative | 2416559 - 2417290 | 26869.7 |
| inositol-1-monophosphatase | FD718_10925 | Not Available | Positive | 2417560 - 2418363 | 28900.6 |
| hypothetical protein | FD718_10930 | Not Available | Positive | 2418956 - 2420158 | 44284.5 |
| hypothetical protein | FD718_10935 | Not Available | Positive | 2420467 - 2421051 | 23079.6 |
| tir domain-containing protein | FD718_10940 | Not Available | Positive | 2421048 - 2423672 | 103415.0 |
| protein translocase subunit secf | FD718_10945 | Not Available | Negative | 2424105 - 2425052 | 34168.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


