Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytoskeleton protein rodz | FD718_10850 | Not Available | Negative | 2404016 - 2404999 | 35771.6 |
| type iv pilus biogenesis/stability protein pilw | FD718_10855 | Not Available | Negative | 2404992 - 2405747 | 28753.2 |
| bifunctional trna (adenosine(37)-c2)-methyltransferase trmg/ribosomal rna large subunit methyltransferase rlmn | FD718_10860 | Not Available | Negative | 2405801 - 2406919 | 42007.8 |
| nucleoside-diphosphate kinase | FD718_10865 | Not Available | Negative | 2407302 - 2407727 | 15703.8 |
| aminopeptidase pepb | FD718_10870 | Not Available | Negative | 2407829 - 2409106 | 45510.7 |
| aminopeptidase pepb | FD718_10875 | Not Available | Negative | 2409165 - 2410451 | 45788.6 |
| fe-s cluster assembly protein iscx | FD718_10880 | Not Available | Negative | 2410739 - 2410933 | 7612.94 |
| isc system 2fe-2s type ferredoxin | FD718_10885 | Not Available | Negative | 2410996 - 2411334 | 12321.5 |
| fe-s protein assembly chaperone hsca | FD718_10890 | Not Available | Negative | 2411337 - 2413190 | 65993.8 |
| co-chaperone hscb | FD718_10895 | Not Available | Negative | 2413325 - 2413840 | 20205.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


