Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease vii large subunit | FD718_10800 | Not Available | Positive | 2393666 - 2395012 | 50247.6 |
| dna ligase | FD718_10805 | Not Available | Negative | 2395131 - 2395367 | 8868.45 |
| alanyl-trna editing protein | FD718_10810 | Not Available | Negative | 2395845 - 2396717 | 32926.9 |
| hypothetical protein | FD718_10815 | Not Available | Positive | 2396905 - 2397405 | 17082.5 |
| hypothetical protein | FD718_10820 | Not Available | Positive | 2397405 - 2397941 | 20627.2 |
| ribosome biogenesis gtpase der | FD718_10825 | Not Available | Negative | 2398000 - 2399499 | 56033.2 |
| outer membrane protein assembly factor bamb | FD718_10830 | Not Available | Negative | 2399713 - 2400876 | 41238.7 |
| tetratricopeptide repeat protein | FD718_10835 | Not Available | Negative | 2400888 - 2401502 | 22332.3 |
| histidine--trna ligase | FD718_10840 | Not Available | Negative | 2401516 - 2402784 | 47379.0 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | FD718_10845 | Not Available | Negative | 2402881 - 2404002 | 41007.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


