Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD718_10750 | Not Available | Negative | 2377204 - 2377617 | 15014.3 |
| phosphoribosylformylglycinamidine synthase | FD718_10755 | Not Available | Negative | 2377955 - 2381860 | 142050.0 |
| membrane-bound lytic murein transglycosylase mltf | FD718_10760 | Not Available | Positive | 2382248 - 2383744 | 56503.4 |
| trna adenosine(34) deaminase tada | FD718_10765 | Not Available | Negative | 2384293 - 2384805 | 18758.5 |
| lysr family transcriptional regulator | FD718_10770 | Not Available | Negative | 2384841 - 2385728 | 33449.4 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | FD718_10775 | Not Available | Positive | 2385951 - 2387081 | 40246.5 |
| s-formylglutathione hydrolase | FD718_10780 | Not Available | Positive | 2387173 - 2388018 | 31505.9 |
| abgt family transporter | FD718_10785 | Not Available | Negative | 2388163 - 2389725 | 55188.9 |
| glutamine-hydrolyzing gmp synthase | FD718_10790 | Not Available | Negative | 2390194 - 2391777 | 58700.3 |
| imp dehydrogenase | FD718_10795 | Not Available | Negative | 2391892 - 2393355 | 51933.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


