Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydropantoate 2-reductase | FD718_10645 | Not Available | Positive | 2357837 - 2358745 | 34608.4 |
| dj-1 family protein | FD718_10650 | Not Available | Positive | 2358738 - 2359355 | 21723.3 |
| trna 4-thiouridine(8) synthase thii | FD718_10655 | Not Available | Negative | 2359495 - 2360943 | 54392.4 |
| flagellar motor protein motb | FD718_10660 | Not Available | Negative | 2361117 - 2362061 | 34782.3 |
| flagellar motor protein poma | FD718_10665 | Not Available | Negative | 2362071 - 2362832 | 27424.1 |
| exodeoxyribonuclease vii small subunit | FD718_10670 | Not Available | Positive | 2363072 - 2363314 | 8947.44 |
| (2e,6e)-farnesyl diphosphate synthase | FD718_10675 | Not Available | Positive | 2363307 - 2364206 | 32629.0 |
| 1-deoxy-d-xylulose-5-phosphate synthase | FD718_10680 | Not Available | Positive | 2364231 - 2366096 | 68259.5 |
| hypothetical protein | FD718_10685 | Not Available | Negative | 2366209 - 2368296 | 79927.2 |
| hypothetical protein | FD718_10690 | Not Available | Positive | 2368443 - 2368679 | 8733.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


