Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(38-40) synthase trua | FD718_10545 | Not Available | Negative | 2334900 - 2335685 | 29601.3 |
| hypothetical protein | FD718_10550 | Not Available | Negative | 2335808 - 2339746 | 144735.0 |
| aspartate-semialdehyde dehydrogenase | FD718_10555 | Not Available | Negative | 2339974 - 2340987 | 37270.3 |
| 4-phosphoerythronate dehydrogenase | FD718_10560 | Not Available | Negative | 2340971 - 2342155 | 43058.6 |
| nucleotide sugar dehydrogenase | FD718_10565 | Not Available | Negative | 2342158 - 2343324 | 43021.4 |
| (na+)-nqr maturation nqrm | FD718_10570 | Not Available | Negative | 2343959 - 2344180 | 8010.86 |
| fad:protein fmn transferase | FD718_10575 | Not Available | Negative | 2344196 - 2345221 | 37746.8 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit f | FD718_10580 | Not Available | Negative | 2345451 - 2346674 | 45219.1 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit e | FD718_10585 | Not Available | Negative | 2346698 - 2347294 | 21546.2 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit d | FD718_10590 | Not Available | Negative | 2347302 - 2347934 | 22771.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


