Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hsp20 family protein | FD718_10490 | Not Available | Negative | 2321126 - 2321548 | 16055.0 |
| efflux rnd transporter periplasmic adaptor subunit | FD718_10495 | Not Available | Positive | 2322066 - 2323301 | 45482.0 |
| efflux rnd transporter permease subunit | FD718_10500 | Not Available | Positive | 2323298 - 2326411 | 115930.0 |
| duf2076 domain-containing protein | FD718_10505 | Not Available | Negative | 2326481 - 2327281 | 28220.2 |
| eal domain-containing protein | FD718_10510 | Not Available | Positive | 2327738 - 2328595 | 32778.3 |
| amidophosphoribosyltransferase | FD718_10520 | Not Available | Negative | 2329519 - 2331036 | 55927.8 |
| bacteriocin production protein | FD718_10525 | Not Available | Negative | 2331106 - 2331597 | 17997.2 |
| cell division protein dedd | FD718_10530 | Not Available | Negative | 2331662 - 2332336 | 24335.2 |
| bifunctional tetrahydrofolate synthase/dihydrofolate synthase | FD718_10535 | Not Available | Negative | 2332390 - 2333658 | 45865.7 |
| acetyl-coa carboxylase carboxyltransferase subunit beta | FD718_10540 | Not Available | Negative | 2333794 - 2334720 | 33994.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


