Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | FD718_10440 | Not Available | Negative | 2309781 - 2310530 | 27502.6 |
| iron abc transporter permease | FD718_10445 | Not Available | Negative | 2310527 - 2311576 | 37783.9 |
| cobalamin abc transporter substrate-binding protein | FD718_10450 | Not Available | Negative | 2311573 - 2312730 | 43019.9 |
| dna alkylation repair protein | FD718_10455 | Not Available | Positive | 2312983 - 2313657 | 25924.5 |
| hypothetical protein | FD718_10460 | Not Available | Positive | 2313738 - 2314433 | 26399.1 |
| maoc family dehydratase | FD718_10465 | Not Available | Negative | 2314484 - 2315167 | 26268.2 |
| mfs transporter | FD718_10470 | Not Available | Negative | 2315666 - 2317129 | 53478.7 |
| nucleoside diphosphate kinase regulator | FD718_10475 | Not Available | Positive | 2317500 - 2317901 | 14726.9 |
| molecular chaperone dnaj | FD718_10480 | Not Available | Negative | 2318038 - 2318955 | 33512.6 |
| molecular chaperone dnak | FD718_10485 | Not Available | Negative | 2319090 - 2320985 | 68241.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


