Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2986 domain-containing protein | FD718_10390 | Not Available | Positive | 2300330 - 2300509 | 6770.25 |
| penicillin-binding protein 2 | FD718_10395 | Not Available | Positive | 2300707 - 2302665 | 73116.4 |
| sdr family nad(p)-dependent oxidoreductase | FD718_10400 | Not Available | Negative | 2302748 - 2303470 | 26442.2 |
| ph domain-containing protein | FD718_10405 | Not Available | Negative | 2303610 - 2303990 | 13932.0 |
| dna ligase | FD718_10410 | Not Available | Negative | 2304392 - 2305303 | 34502.3 |
| pts sugar transporter subunit iic | FD718_10415 | Not Available | Positive | 2305568 - 2306623 | 36775.2 |
| hypothetical protein | FD718_10420 | Not Available | Negative | 2306628 - 2307149 | 19718.2 |
| hypothetical protein | FD718_10425 | Not Available | Positive | 2307387 - 2308052 | 25239.1 |
| hypothetical protein | FD718_10430 | Not Available | Positive | 2308203 - 2308646 | 17559.8 |
| aspartoacylase | FD718_10435 | Not Available | Positive | 2308742 - 2309635 | 33677.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


