Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobyric acid synthase | FD718_10340 | Not Available | Positive | 2290450 - 2291928 | 53416.3 |
| transporter | FD718_10345 | Not Available | Negative | 2292043 - 2293134 | 40556.4 |
| amino acid abc transporter permease | FD718_10350 | Not Available | Negative | 2293369 - 2294328 | 35800.0 |
| transporter substrate-binding domain-containing protein | FD718_10355 | Not Available | Negative | 2294331 - 2295146 | 30503.4 |
| amino acid abc transporter permease | FD718_10360 | Not Available | Negative | 2295272 - 2296114 | 31203.6 |
| amino acid abc transporter atp-binding protein | FD718_10365 | Not Available | Negative | 2296125 - 2296865 | 27517.4 |
| 3-deoxy-7-phosphoheptulonate synthase arog | FD718_10370 | Not Available | Positive | 2297299 - 2298354 | 38669.3 |
| hypothetical protein | FD718_10375 | Not Available | Positive | 2298864 - 2299355 | 17862.8 |
| rhomboid family intramembrane serine protease | FD718_10380 | Not Available | Positive | 2299333 - 2299911 | 21539.8 |
| duf1840 domain-containing protein | FD718_10385 | Not Available | Positive | 2299923 - 2300243 | 11766.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


