Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | FD718_10240 | Not Available | Negative | 2274257 - 2275591 | 49970.2 |
| abc transporter permease | FD718_10245 | Not Available | Negative | 2275581 - 2276402 | 31393.2 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | FD718_10250 | Not Available | Negative | 2276405 - 2276950 | 20563.3 |
| dtdp-4-dehydrorhamnose reductase | FD718_10255 | Not Available | Negative | 2276968 - 2277858 | 32339.1 |
| glucose-1-phosphate thymidylyltransferase rfba | FD718_10260 | Not Available | Negative | 2277871 - 2278743 | 32346.7 |
| dtdp-glucose 4,6-dehydratase | FD718_10265 | Not Available | Negative | 2278823 - 2279884 | 39817.5 |
| yfcl family protein | FD718_10270 | Not Available | Negative | 2279976 - 2280236 | 9543.19 |
| elongation factor p hydroxylase | FD718_10275 | Not Available | Negative | 2280258 - 2280809 | 21345.2 |
| trimeric intracellular cation channel family protein | FD718_10280 | Not Available | Positive | 2281105 - 2281740 | 22940.0 |
| hypothetical protein | FD718_10285 | Not Available | Negative | 2281825 - 2282175 | 13435.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


