Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| capsular biosynthesis protein | FD718_10190 | Not Available | Negative | 2262329 - 2263591 | 48759.6 |
| undecaprenyl-phosphate glucose phosphotransferase | FD718_10195 | Not Available | Negative | 2263614 - 2264447 | 31560.9 |
| sugar transferase | FD718_10200 | Not Available | Negative | 2264680 - 2265231 | 20471.3 |
| nad-dependent epimerase/dehydratase family protein | FD718_10205 | Not Available | Negative | 2265240 - 2266214 | 35851.7 |
| polysaccharide biosynthesis protein | FD718_10210 | Not Available | Positive | 2266309 - 2268174 | 69302.5 |
| glycosyltransferase family 2 protein | FD718_10215 | Not Available | Positive | 2268176 - 2268925 | 29356.3 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing) | FD718_10220 | Not Available | Negative | 2268922 - 2270058 | 42206.5 |
| glycosyltransferase family 1 protein | FD718_10225 | Not Available | Negative | 2270145 - 2271215 | 40838.2 |
| glycosyltransferase | FD718_10230 | Not Available | Negative | 2271263 - 2273329 | 79062.0 |
| class i sam-dependent methyltransferase | FD718_10235 | Not Available | Negative | 2273425 - 2274270 | 32973.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


